Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSLVLVYTTFSNVKEAKAVSEELLNKKLIICVNIFPKVNSLYLWKGEINSSCEVIAIMKSRSDQVDKIVEKVEAMHSYDQPAIVIIPIEKVNKSFANWVNSVIDVSSIGV
1O5J Chain:A ((-2-100))
--HMILVYSTFPNEEKALEIGRKLLEKRLIACFNAF-EIRSGYWWKGEIVQDKEWAAIFKTTEEKEKELYEELRKLHPYETPAIFTLKVENVLTEYMNWLRESVL------
General information:
TITO was launched using:
RESULT:
Template:
1O5J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64848 for 637 contacts (-101.8/contact) +
2D Compatibility (PS) -11261 + (NN) -5274 + (LL) 456
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -92327.0 ( -144.94 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1O5J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5J-query.scw
PDB file :
Tito_Scwrl_1O5J.pdb
: