Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK |
2O5V Chain:A ((4-346)) | VRLSALSTLNYRNLAPGTLNFPEGVTGIYGENGAGKTNLLEAAYLALTGQTDAP-RIEQLIQAGETEAYVRADLQQGGSLSIQEVGLGRGRRQLKVDGVRA-RTGDL-PRGGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRGG------EEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQLGSR-KTLALTLTESTSPE----------TYAADLRGRRAEELARGSTVTGPHRDDLLLTLGDFPASDYASRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELDPHRRQYLLDLAASVPQAIVTGTELAPG----AAL--TLRAQAGRFT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111465 for 2849 contacts (-39.1/contact) +
2D Compatibility (PS) -36820 + (NN) -8541 + (LL) 2180
1D Compatibility (HY) -12000 + (ID) 4950
Total energy: -171596.0 ( -60.23 by residue)
QMean score : 0.472
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