Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYFRYKQFNKDVITVAVGYYLRY-TLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
1HLV Chain:A ((4-52)) | ----KRRQLTFREKSRIIQEVEENPDLRKGEIARRF-----NIPPSTLSTILKNKRAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37175 for 267 contacts (-139.2/contact) +
2D Compatibility (PS) -4705 + (NN) 2448 + (LL) 14036
1D Compatibility (HY) 0 + (ID) 350
Total energy: -25746.0 ( -96.43 by residue)
QMean score : 0.466
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