Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQTNIVTSSIHSSEMT--GEEHNVLDVRNDDEWRKGHLKQAIHIPHGKLLNEDIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
3GK5 Chain:A ((102-194))
-------------------------------------RSINAADLYENIKAYTVLDVREPFELIFGSIANSINIPISELREKWKILERDKKYAVICAHGNRSAAAVEFLSQLGLN-IVDVEGGIQSWIEEG-
General information:
TITO was launched using:
RESULT:
Template:
3GK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47464 for 659 contacts (-72.0/contact) +
2D Compatibility (PS) -9811 + (NN) -1580 + (LL) 3140
1D Compatibility (HY) -5600 + (ID) 1400
Total energy: -62715.0 ( -95.17 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_3GK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GK5-query.scw
PDB file :
Tito_Scwrl_3GK5.pdb
: