Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQQLIEALKSKEDKMIEIRRYL----------HQHPELSFHEDETAKYIAEFYKGKDVEVETNVGPRGIKVTIDSGKP-GKTLAIRADFDALPITEDTGLSFASQNKGVMHACGHDAHTAYMLVLAETLAEMKDSFTGKVVVIHQPAEEV-----PPGGAKAMIENGVLD---------------------GVDHV-------------LGVHVMS---TMKTG---NVYYRPGYVQTGRAFFKLKVQGKGGHGSS-P-HMANDAIVAGSYFVTALQTVVSRRLSPFETGVVTIGSFDGKG-QFNVIKDVVEIEGDVRGLTDATKATIEKEIKRLSKGLEDMYGVTCTLEYNDDYPALYNDPEFTEYVAKTLKEANLDFGVE-MCEPQPPSEDFAYYAKERPSAFIYTGAAVEDGEIYPHHHPKFNISEKSLLISAEAVGTVVLDYLKGDN |
| 3N5F Chain:A ((3-407)) | -----------QGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYE-DAAGNLIGRKEGTNPDATVVLVGSHLDSVYNGG----CF--------DG---PLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVT--G--IAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEARR----TGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTERLQEMPPVLCSDEVKRAAEAACQK----LGYPSFWLPSGAAHDSVQLAPICPIG-MIFVRSQD----GVSHSPAEWSTKEDCAAGAEVLYHTVWQLAQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144144 for 2867 contacts (-50.3/contact) +
2D Compatibility (PS) -37070 + (NN) -15609 + (LL) 1864
1D Compatibility (HY) -10000 + (ID) 2900
Total energy: -207859.0 ( -72.50 by residue)
QMean score : 0.476
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