Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNREMLYLNRSD-IEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAM-PSHIGGEHAISGIKWIGSKHDNPSKRNMERAS-GVIILNDPETNYPIAVMEASLISSMRTAAVSVI-AAKHLAKKGFKDL-TIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWL-QKGA-FISNISI-----MDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQN-IGTTLNLY----------------- |
| 1X7D Chain:A ((2-341)) | ----TYFIDVPTMSDLVHDIGVAPFIGELAAALRDDFKR-----WQAFDKSARVASHSEVGVIELMPVADKS---RYAFKYVNGHPANTARNL--HTVMAFGVLADVDSGYPVLLSELTIATALRTAATSL-MAAQALARPNAR-KMALIGNGAQSEFQALAFHKHLG-IEEIVAYDTDPLATAKLIANLKEY-SGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEPGMHLNAVGGDCPGKTELHADVLRNA-RVFVEYEPQTRIEGEIQQ-------LPADFPVVDLWRVLRGETEGRQSDSQVTVFDSVGFALEDYTVLRYVLQQAEKRGMGTKIDLVPWVEDDPKDLFSHTRGRA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1X7D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129708 for 2622 contacts (-49.5/contact) +
2D Compatibility (PS) -33170 + (NN) -15684 + (LL) 2020
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -188892.0 ( -72.04 by residue)
QMean score : 0.491
|
|
|