Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKKIISIAIIVLAL-VLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFS-STGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPL-YGSKKNLVYD-NKVLDKNS--VGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSI-APSVYSINMNMYTRLLLLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVK-FSLDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDKSIYDKLIKAYNV-KSLTTDGQKVNNKDGIYQIVKITTDQ-SMPREVNYLTHSSAGILSK-K-FVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNETEKGSYGSPKIKNITLKFNG-DPNNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGDKFKIASPITPLVDTGNEQRQDLEKVEKAINQ-- |
| 3LM3 Chain:A ((13-448)) | EPLTIEGNRFVTLCIMIRT-----TPWEVSRD----------VKLHPRDEVDWHT-----------------------LEGVRALREAFAT-----------NNPNGRLTWGFTMNA-----LEDG------RKNYREIRDYVVECQKKYGDEVTYFPGYF-PAMYLPRERVNREMSEAIEIISKMVGN-------------------GYRP----------------QSIMGGFLSADNL----RYLAEKENIHVAHAVIWSQHNGGGADGSPSYPFYPSTEHFCKPAQG-KSDFIDCVNLDGWTMDFICARRSGQTGHGIDGYNSRRGVGPIETYKGWGLDLGHRE-----------------VMHTEAIHFDKGLELNGFGWVANIWEAQMVHEFGKDLICDA-------MKMWVTGTKERWPDT---------------HFVTFGEFGELWRKQYKSNDDWNYRFVERGSGLGDSYN--NLEIKWF-MNKEFRLALLRDWHTK---NSPAYVIDFTRYD---------------LQAHEPADPSPEKPAKDWSLINKINQ------------KALRPQDKPVLIDKLEKEDQDLIRKYYPELL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 114582 for 3677 contacts (31.2/contact) +
2D Compatibility (PS) -44070 + (NN) -15001 + (LL) 8852
1D Compatibility (HY) -5600 + (ID) 4200
Total energy: 54563.0 ( 14.84 by residue)
QMean score : 0.184
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