Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIINTTRLPEALGPYSHATVVNGMVYTSGQIPLNV-DGKIVSADVQAQTKQVLENLKVVLEEAGSDLNSVAKATIFIKDMNDFQKINEVYGQYFNEHKPARSCVEVARLPKDVKVEIELVSKIKEL
3M4S Chain:B ((25-148))
LTVVASPLAPEAVGAYSQAIICNGMVYCSGQIGLDRKTGDFAGKTIEEQSKQVMTNLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYAEAFGNHKPARACFAAAALPKGALVEVECIATL---
General information:
TITO was launched using:
RESULT:
Template:
3M4S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41639 for 980 contacts (-42.5/contact) +
2D Compatibility (PS) -13694 + (NN) -9460 + (LL) 344
1D Compatibility (HY) -13200 + (ID) 2700
Total energy: -80349.0 ( -81.99 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3M4S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M4S-query.scw
PDB file :
Tito_Scwrl_3M4S.pdb
: