Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIMITGALGQIGTELVVKCREIYGT-DNVLATDIREPEADSPVQNGPFEILDVTDRDRMFELVRDFEADSLMHMAALLSATAEKNPILAWDLNMGGLMNALEAARTYNL-HFFTPSSIGAFGDSTPKVNTPQVTIQQPTTMYGVNKVAGELLCQYYFKRFGVDTRSVRFPGLISHVKEPGGGTTDYAVEIYFKAVREGHYTSFIDKGTYMDMMYMDDAIEAIIKLMEADDAKLETRNGYNLSAMSFDPEMVKEAIQEYYPNFTLDYDVDPIRQGIANSWPDSIDTSCSRGEWGFDPKYDLASMTKLMLEAIEQKDTVKNNN |
| 3AJR Chain:A ((1-312)) | --MILVTGSSGQIGTELVPYLAEK-YGKKNVIASDIVQRD----TGGIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKEDF-RDKIAATWPESLDSSEASNEWGFSIEYDLDRTIDDMIDHISEKLGIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131580 for 2782 contacts (-47.3/contact) +
2D Compatibility (PS) -33489 + (NN) -17437 + (LL) 228
1D Compatibility (HY) -28000 + (ID) 6850
Total energy: -217128.0 ( -78.05 by residue)
QMean score : 0.436
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