Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMIDAQDAMDQHDAWDYNAEIKTILSKLGIHD-T-TKYIKELSGGQQKRVVLAKTLIEQP--DLLLLDEPTNHLDFESISWLINYVKQY---PHTVLFVTHDRYFLNEVSTRIIEL------NRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQ---------------------FEGKLKTGQTV-----------KVAYFKQTDETL------------------------------------------------------------------------DRDIRMIDYLREESEVAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQP---NVLLLDEPTNDLDTETLTILEDYIHTF---GGTVITVSHDRYFLNKVAQSYWFIH------DGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSYTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ |
2R6F Chain:A ((487-944)) | ---------------------------------------------------------------------------------------------------------------------------------------------FLQNVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLIATLKSMRDLGNTLIVVEHDEDTML-AADYLIDIGPGAGIHGGEVVAA-GTPEEVMNDPNS--------------LTG---QYLS----G-----KK----F------IP-IPA--------ERRRPDGRWLEVVGAR-----EHNLKNVSVKIPLGTFVAVTGVSGSGKSTLVNEVLYKALAQKLHRAKAKPGEHRDIRGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDDIRDVFASTNEAKVRGYKKGRFSFNVKGGRCEACHGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKNIAEVLDMTVEDALDFFAS----IPKIK-RKLETLYDVGLGYMKLGQPATTLSGGEAQRVKLAAELHRRSNGRTLYILDEPTTGLHVDDIARLLDVLHRLVDNGDTVLVIEHNLDVIK-TADYIIDLGPEGGDRGGQIV-AVGTPEEVAEVK------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2R6F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -96873 for 2597 contacts (-37.3/contact) +
2D Compatibility (PS) -34574 + (NN) -2972 + (LL) 22108
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -131311.0 ( -50.56 by residue)
QMean score : 0.328
|
|
|