Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDLLQAQQKLIPDLIDKMYKRFSILTTISKNQPVGRRSLSEHMDMTERVLRSETDMLKKQDLIKVKPTGMEITAEGEQLISQLKGYFDIYADDNRLSEGIKNKFQIKEVHVVPG-DADNSQSVKTELGRQAGQLLEGILQEDAIVAVTGGSTMACVSEAIHLLPYNVFFVPARGGLGENVVFQAN----------TIAASMAQQAGGYYTT----MYVPDNVSETTYNTLLL-EPSVINTLDKIKQANVILHGIG--DALKMAHRRQS---PEKVIEQLQHHQAVGEAFGYYFDTQGQ---IVHKVKTIGLQLEDLESKDFIFAVAGGKSKGEAIKAYLTIAPKNTVLITDEAAAKIILE |
| 3NZE Chain:A ((12-263)) | ------------------------------------------------------------------------------------------------LESQIRNQYGV-DVHVVPVLDTLNEAETLDRVAMQAARTIGPLVDSNAIIGVAWGATLSAVSR--HL---------TRKMTHDSIVVQLNGAGNMQTTGITYASDIMRRFGSAYGARVEQFPVPAFFDHASTKTAMWNERSVQRILDLQARMSIAIFGVGSVD-----HVYAGGYLDEHDLTMLAADDVVGDVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALA-AGLATDLILDEASARRLVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117396 for 1862 contacts (-63.0/contact) +
2D Compatibility (PS) -23871 + (NN) -8282 + (LL) 9212
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -153937.0 ( -82.67 by residue)
QMean score : 0.536
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