Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYEDVLYPVESVLKKDKVN-FVQAEVTKIDRDAKKVETNQ-----G-IYDFDILVVALGFVSETFGIEGMK-DHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMF-SEELVNHAVSYLEDRGVEFKIATPIVACNEKG----FVVEVDGEKQQLNAGTSVWAAGVRGSKLME-ESFEG-VKRGRIVTKQDLTINGYDNIFVIGDCSAFIPAGEERP-LPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHDGVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF |
| 3IWA Chain:A ((4-348)) | -----KHVVVIGAVALGPKAACRFKRLD--PEAHVTMIDQA----------------------------------VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA------------GEVSKAVIVGGGFIGLEMAVSLADMW------------GIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITD--K-RTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158059 for 2199 contacts (-71.9/contact) +
2D Compatibility (PS) -28820 + (NN) -6729 + (LL) 7412
1D Compatibility (HY) -12000 + (ID) 3450
Total energy: -201646.0 ( -91.70 by residue)
QMean score : 0.520
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