Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEF-SLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQII-DGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
4R3E Chain:A ((16-168))
----------------KVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTL----------------------------GRADELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNPHKIKSCEV--
General information:
TITO was launched using:
RESULT:
Template:
4R3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59272 for 1209 contacts (-49.0/contact) +
2D Compatibility (PS) -15966 + (NN) -4316 + (LL) 2776
1D Compatibility (HY) -10400 + (ID) 3200
Total energy: -90378.0 ( -74.75 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_4R3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R3E-query.scw
PDB file :
Tito_Scwrl_4R3E.pdb
: