Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATP-VAITNKYLSE---LIDMPTKPGVIVSDTGSTKAMIQQHESNLLK-HNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ |
| 3DOJ Chain:A ((21-196)) | MMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEHGAS--VCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGGVLE-QICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEG-PVSGSKKPA--------EDGQLIILAAGD--K-ALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108370 for 1528 contacts (-70.9/contact) +
2D Compatibility (PS) -18538 + (NN) -8822 + (LL) 13468
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -126862.0 ( -83.02 by residue)
QMean score : 0.493
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