Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLGKMSDLDQILNLVEEAKELMKEHDNEQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVIHRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQLMEYPPYDKGEPFYAYYKNLKE
2AE6 Chain:A ((9-148))
TIRLVAEADWPALHALDQII-----------------SLAAYQEKMKDETIFVAISGQQLAGFIEVHPPTSLA---------AHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMATNQEAIRFYEKHGFVQEAHFKEEF------------------
General information:
TITO was launched using:
RESULT:
Template:
2AE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79387 for 792 contacts (-100.2/contact) +
2D Compatibility (PS) -13085 + (NN) -2662 + (LL) 1576
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -98808.0 ( -124.76 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_2AE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AE6-query.scw
PDB file :
Tito_Scwrl_2AE6.pdb
: