Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------MSILTIILIALLVILLFRV--GLSILRFLIYVGLVLLCIYLGYQGLIWLLDFFQINSGFLPHFQFNN---------------------------------------------------------------------------------------------------- |
| 4O6Y Chain:A ((10-219)) | PIFMVVRVLGFIIAALVLTWTVHYRGGLALSSDNKDHIFNVHPVMMVIGLILFNGEAMLAYKSVQGTKNLKKLVHLTLQLTAFILSLIG-VWAALKFHIDKGIENFYSLHSWLGLACLFLFAFQWAAGFVTYWYPGGSRNSRASLMPWHVFLGISIYALALVTATTGILEKVTFLQVNQVITRYSTEAMLVNTMGVLILILGGFVILGVVT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61968 for 353 contacts (-175.5/contact) +
2D Compatibility (PS) -6425 + (NN) -3426 + (LL) 176
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -76793.0 ( -217.54 by residue)
QMean score : 0.456
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