Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAYQQ---SRVGLYIDNSIQSIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYDTSNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCK-ESLGFDRDTNWLSVLPIYHISGLSV-LLRAVIEGFTVRIVD-KFNAEQILTMIKNERITHISLVPQTLNWLMQQG---LHEPYNLQKILLGGAKLSATMIETALQ-YNLPIYNSFGMTETCSQFLTATPEMLHARPDTVGMPSANVDVKIKNPN-----KEGHGELMIKGANVMNGYLYPTDLTG-TFENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESD-----ISKAQLIAYLSKHLAKYKVPKHFEKVDTLPYTSTGKLQRNKLYRG |
| 2V7B Chain:A ((26-528)) | -AAYLFRLNETRAGKTAYIDDTGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESA---GCQ-LIVSQP--------LAPLFEELIDA--AAPAAKAAATGCDDIAFWLYS-----KPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPREIGERFTAHFGCEILDGIGSTEMLHIFLSNRAG--AVEYGTTGRPVPGYEIELRDEAGHAVPDGEVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDKYCRLPNGCYVYAGRSDDMLK----YVSPVEVEMVLVQHDAVLEAAVVGVDHGG-LVKTRAFVVLKREFAPSEILAEELKAFVKDRLAPHKYPRDIVFVDDLPKTATGKIQRFKLRE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -295353 for 4124 contacts (-71.6/contact) +
2D Compatibility (PS) -49617 + (NN) -12820 + (LL) 1028
1D Compatibility (HY) -15600 + (ID) 4850
Total energy: -377212.0 ( -91.47 by residue)
QMean score : 0.439
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