Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVNLYD-YANQLEQALRESEEYKAIKEAFANVKANEESKKLFDEFRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQIIVKPLDEIYAD
1NSG Chain:B ((1-94))
VAILWHEMWHEGLEEASRLYFGERNVKGMFEVLEPLHAMMERGPQ--------TLKETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHVFRRIS-------------
General information:
TITO was launched using:
RESULT:
Template:
1NSG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 27960 for 626 contacts (44.7/contact) +
2D Compatibility (PS) -10601 + (NN) -7576 + (LL) 1976
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: 7559.0 ( 12.08 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_1NSG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NSG-query.scw
PDB file :
Tito_Scwrl_1NSG.pdb
: