Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
3NX6 Chain:A ((2-95))
SIKPLHDRVVVKPI-------------------STKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVIG
General information:
TITO was launched using:
RESULT:
Template:
3NX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21278 for 503 contacts (-42.3/contact) +
2D Compatibility (PS) -8022 + (NN) 325 + (LL) 1312
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -36113.0 ( -71.80 by residue)
QMean score : 0.704
(partial model without unconserved sides chains):
PDB file :
Tito_3NX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NX6-query.scw
PDB file :
Tito_Scwrl_3NX6.pdb
: