Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNDLETLKHIIDSSNRITFFTGAGVSVASGVPDFRSMGGLFDEISKDGLS-PEYLLSRDYLEDDPEGFINFCHKRLLFVDTKPNIVHDWIAKLERNQQSLGVITQNIDGLHSDAG--SQHVDELHGTLNRFYCNACHKSYT----KSDVIDRTLKHCDNCGGAIRPDIVLYGEMLDQPTIIRALNKIEHADTLVVLGSSLVVQPAAGLISHFKGD-NLIIINKDRTPYDSDATLVIHDDMVSVVKSLMTE |
| 4V1C Chain:E ((16-226)) | -------------ACQRVVVMVGAGISTPSGIPD--------SNLQQYDLPYPEAIFELPFFFHN-KPFFTLA-KELYPGNYKPNVTHYFLRLLHDKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQRFLLHVVD-FPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINRD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77578 for 1459 contacts (-53.2/contact) +
2D Compatibility (PS) -20653 + (NN) -5240 + (LL) 3360
1D Compatibility (HY) -17200 + (ID) 3100
Total energy: -120411.0 ( -82.53 by residue)
QMean score : 0.359
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