Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKELTMDGKHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEK--------------INNAQTATYTLTLNDGNKKVVNLKKND---D---------AKNSIDPSTIKQIQIVVK
3EA6 Chain:A ((92-213))
-------------------------------------------SRNIPINIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEYNIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKF-HLDVDI-
General information:
TITO was launched using:
RESULT:
Template:
3EA6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35344 for 637 contacts (-55.5/contact) +
2D Compatibility (PS) -10437 + (NN) -2657 + (LL) 2620
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -51468.0 ( -80.80 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_3EA6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EA6-query.scw
PDB file :
Tito_Scwrl_3EA6.pdb
: