Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKN-----IDGSKDISDVTKDVIDILDHL
4K46 Chain:A ((1-209))
MRIILLGAPGAGKGTQAQFIMAKFGIPQISTGDMLRAAIKAGTELGKQAKSVIDAGQLVSDDIILGLVKERIAQDDCAKGFLLDGFPRTIPQADGLK----EVGVVVDYVIEFDVADSVIVERMAGRRAHLASGRTYHNVYNPPKVEGKDDVTGEDLVIREDDKEETVLARLGVYHNQTAPLIAYYGKEAEAGNTQYLKFDGTKAVAEVSAEL-------
General information:
TITO was launched using:
RESULT:
Template:
4K46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38047 for 1586 contacts (-24.0/contact) +
2D Compatibility (PS) -22153 + (NN) -12417 + (LL) 956
1D Compatibility (HY) -18400 + (ID) 5350
Total energy: -95411.0 ( -60.16 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_4K46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K46-query.scw
PDB file :
Tito_Scwrl_4K46.pdb
: