Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLENKVAVVTGASTGIGQASAIALAQEGAYVLAV-----DIAEAVSETVDKIKSNGDNAKAYNVDISDEQQVVDFVSDIKEQFGRIDVLFNNAGVDNAAGRIHEYPIDVYDKIMNVDMRGTILMTKMMLPLMMNQGGSIVNTSSFSG----QAEDLYRSGYNAAKGAVINFTKSIAIEYGRDGIRSNAIAPGTIETPLVDKLTGTSEDDAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGGVMAYTWPGEMLSDDSWKRTLE |
4BMS Chain:F ((1-246)) | MYRLLNKTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEI-------GRNVTAVKADVTKLEDLDRLYAIVREQRGSIDVLFANSGAIEQK-TLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRD-GGSVILTSSVAGVLGLQAHDTY----SAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTPIIENQVSTQEE--ADELRAKFAAATPLGRVGRPEELAAAVLFLASDDSSYVAGIELFVDGGL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86793 for 1997 contacts (-43.5/contact) +
2D Compatibility (PS) -25558 + (NN) -6879 + (LL) 1620
1D Compatibility (HY) -14800 + (ID) 4900
Total energy: -137310.0 ( -68.76 by residue)
QMean score : 0.483
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