Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MKEKFDLVKLLNILKKNIKLLLILPAICLVVSTALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNRISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF |
1YTL Chain:A ((17-174)) | KMATLLEKGKPVANMIKKAKRPLLIVGPDMTDEMFERVKKFVEKDITVVATGSAITRFIDAGLGEKVNYAVLHELTQFLL--------DPDWKGFDGQ--------------GNYDLVLMLGS---IYYHGSQMLAAIKNFAPH--IRALAID------------RYYHPNADMSFGN---LWKKEEDYLKLLDEILAEL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YTL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74063 for 1277 contacts (-58.0/contact) +
2D Compatibility (PS) -16258 + (NN) -2471 + (LL) 4440
1D Compatibility (HY) -400 + (ID) 1050
Total energy: -89802.0 ( -70.32 by residue)
QMean score : 0.338
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