Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MQNQYFTVQENYKERFYQIPKVFFTSENYKNLTNDMKIAYAILRDRLNLSIKNSWVDEDGNIYFVYS----NEKLMEILNCKKEKLTKIKKGLENDGLLIQKRRGLNKPNIL-YLMKPIVTERDIYKIEKEENDVEPYGEKDVRFSNVQKFENRTSRSSKIERPE----VRKSNTNDTDFND----------IDFNDTENNDMNDLNDIKYKNEISNHSNHSNQFTHNFD-DKEMLLQEFPEQLTNYLLKYDYRDLEIIKAVILKAKKSFNS-RHEDMHYML------------EDIEDEILTSLKRLKKAIHDRGVKGQKETIKSMQAYLMQTILTELEETHALYMRRKNMKQYNIFNQ------------------------------- |
| 1LI5 Chain:A ((1-402)) | MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL----GYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFD-VPTDPTYGVLSRQKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYW---MHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37281 for 2289 contacts (16.3/contact) +
2D Compatibility (PS) -33907 + (NN) -12369 + (LL) 380
1D Compatibility (HY) -4400 + (ID) 1750
Total energy: -14765.0 ( -6.45 by residue)
QMean score : 0.271
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