Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKASAPLIAQQEEDPNAPIDTDNLTQRLH-NFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSYQL-DYKIAINLRGNNTAFYSVSLPYIELFNKRSNNPIVIFQQSLKELMSFALK
3OF5 Chain:A ((6-214))
KFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLKPVASGQSQFSELCEDVESILNA-YK--HKFTAAEINLISFNQAVAPHIIAAKTKV--DISIENLKQFIEDKYNQDLDILFIEGAGGLLTPYSDHTTQLDLIKALQIPVLLVSAIKVGCINHTLLTINELNRHNIKLAGWIANCNDSNIKYIDEQINTIEEL---SGYKCSAKISRNADYLDFIDL
General information:
TITO was launched using:
RESULT:
Template:
3OF5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121840 for 1667 contacts (-73.1/contact) +
2D Compatibility (PS) -22184 + (NN) -10420 + (LL) 168
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -169276.0 ( -101.55 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_3OF5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OF5-query.scw
PDB file :
Tito_Scwrl_3OF5.pdb
: