Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKWIKGAVVFVGGFATITTFSLIYHQKPKAPLNNQPSLLNDDEVKYPLQDYTFTQNPQPTNTESSKDATIKALQEQLKAALKALNSKEMNYSKEETFTSPPMDPKTTPPKKDFSPKQLDLLASRITPFKQSPKNYEENLIFPVDNPNGIDSFTNLKEKDIATNENKLLRTITADKMIPAFLITPISSQIAGKVIAQVESDIFASMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTNAKGADIKGYNGLVGELIERNFQRYGVPLLLSTLTNGLLIGITSALNNRGNKEEVTNFFGDYLLLQLMRQSGMGINQVVNQILRDKSKIAPIVVIREGSRVFISPNTDIFFPIPRENEVIAEFLK |
| 2BHV Chain:A ((166-376)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------NKLLRTITADKMIPAFLITPISSQIAGKVIAQVESDIFAHMGKAVLIPKGSKVIGYYSNNNKMGEYRLDIVWSRIITPHGINIMLTN-------AYNGLVGELIERNFQRYGVPLLLSTLTNGLLIGITSAFGDYLLMQLMRQ-------------SGMGINQVVNQILRDKSKIAPIVVIREGSRVFISPNTDIFFPIPRENEVIAEFLK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BHV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105190 for 1326 contacts (-79.3/contact) +
2D Compatibility (PS) -20222 + (NN) -1743 + (LL) 9800
1D Compatibility (HY) -30000 + (ID) 8850
Total energy: -156205.0 ( -117.80 by residue)
QMean score : 0.476
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