Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSTRIGSKIVMMVCAVVIVISAVMGVIISYKVESVLQSQATELLQKKAQLVSFKIQGIMKRIFMGANTLERFLSDENGAINDTLKRRMLSEFLLANPHVLLVSAIYTNNNERMITAMNMDSKIAYPNTALNENMTNQIHSLKSITRSDPYYKEVNGDKIYGMDITLPLMGKNQNVIGALNFFLNIDAFYTDVVGKKKSNTFLMGKDGRILINPNREIQDKILSAINPDKRVAKAVEYYNQNEAGTLSYHSLSGNTETFLAIQPFDFFEEKGNNGNHWRWAIGKYVNKSLVFKEATNTKFIIITTLILGVLVLAFLVFIIISNLITKRISRVNNTLNDFFNLLNNPKNNHAISLTPPSAYDEIGQMQASINENILKTQESIQADNKAIQNSIEVTNYVENGDFTQEIACVPKNKDLQALRNTINSIIQYFRNQIGADIESLNNALEHYKNLDFTHHIQNPKANMEKALNTLGQEISSMLKASLGFANALNHESKDLKTCVDNLTKTAHKQERSLKNTTQSLEEITNIITMIDSKSQEMISQGEDIKSVVDMIRDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLA--------ERTQKSLSEIEANINILVQSIADNAESIKMQNKGVENIHNSINALQQDVQDNLTIANHSLQVSTKIDGISQDILEDVSKKKF |
| 2YFA Chain:A ((18-253)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMGDIGQLNKDLTDLRIARLQYMIANGDDTAAANTLAKLDAFSKQQAYLATTFKS------------PENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAENSSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26758 for 1625 contacts (-16.5/contact) +
2D Compatibility (PS) -24370 + (NN) -6543 + (LL) 32284
1D Compatibility (HY) 1600 + (ID) 1250
Total energy: -25037.0 ( -15.41 by residue)
QMean score : 0.436
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