Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKRYENFDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLV----LVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGN---FGNALGAFYAKKM---GLNIAKIKVVTNSNDVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTHEKTLVSATASY---EKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 4P0G Chain:A ((7-435)) | ---APTALERVQKEGVLRVITRNSPAT---YFQDRNGET------GFEY-ELAKRFAERLGVELKIETADNLDDLYAQLSREG-------------------GPALA----AAGLTPGREDDASVRYSHTYLDVTPQIIYRNGQQRPTRPEDLVG-KRIMVL-----KGSSHAEQLAELKKQYPELK-YEESDAVE-----VVDLLRMVDVGD----IDLTLVDSNELAMNQVYFPNVRVAFDF---------GEARGLAWALPGGDDDSLMNEVNAFLDQAKKEGLLQRLKDRYYGHVDVLGYVGAYTFAQHLQQR-LPRYESHFKQSGKQLDTDWRLLAAIGYQESLWQPGATSKTGVRGL------MMLTNRTAQAMGVSNRLDPKQSIQGGSKYFVQIRSE--LPESIKEPDRSWFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTRYGYARGGETVHFVQNVRRYYDILTWVTQPQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66498 for 3474 contacts (-19.1/contact) +
2D Compatibility (PS) -43922 + (NN) -14182 + (LL) 5328
1D Compatibility (HY) -9200 + (ID) 3750
Total energy: -132224.0 ( -38.06 by residue)
QMean score : 0.238
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