Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLISTIQNALNNLTTPIDVLTITANGEPTL---YPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQAL-KEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLIKGV----NDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
2CW6 Chain:A ((23-175)) | -----------------------------------------------------IVSTPVKIKLIDMLSE---AGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTP----NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSA-NISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80876 for 1068 contacts (-75.7/contact) +
2D Compatibility (PS) -15442 + (NN) -3723 + (LL) 3560
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -102981.0 ( -96.42 by residue)
QMean score : 0.496
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