Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKKSVIVGAISLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNG-NQSGAYGSNTPNMP-------TASNPTGGLTHGALGTRGYKGLSNQQYAI-NGFG---------FVVGYKHFFKKAPQFGMRYYGFFDF--ASSYYKYYTYNDYGMRDARKGSQSFMFGYGAGT--DVLFNPAIFNRENLHFGFFLGVAIGGTSWGPTNYYFKDLAEEYRGSF-HPSNFQVLVNGGIRLG------TKHQGFEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF |
| 1FZE Chain:C ((5-307)) | EIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEPCKDTVQIHDITGKDCQDIANKGAKQSGLYFIKPLKANQQFLVYCEIDGSGNGWTVFQKRLDGSVDFKKNWIQYKEGFGHLSPTGTTEFWLGNEKIHLISTQSAIPYALRVELEDWNGRTSTADYAMFKVGPEADKYRLTYAYFAGGDAGDAFDGFDFGDDPSDKFFTSHNGMQFSTWDNDNDKFEGNCAEQDGSGWWMNKCHAGHLNGVYYQGGTYSKASTPNGYDNGIIWATWKTRWYS------MKKTTMKIIPFNRLTI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45461 for 1935 contacts (-23.5/contact) +
2D Compatibility (PS) -28698 + (NN) -8148 + (LL) 1236
1D Compatibility (HY) -1200 + (ID) 1850
Total energy: -84121.0 ( -43.47 by residue)
QMean score : 0.149
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