Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYM--GIDMAVGMVKIMCERYPHIPVALHLDHG-----------TTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAERFVKESQ-VDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRL-TNIPLVLHGASAIPDDVRKSYLDAGGDLKGSKGVPFEFLQESIKGGINKVNTDTDLRIAFIAEVRKVANEDKS-QFDLRKFFSPAQLALKNVVKERMKLLGSANKI- |
| 1GVF Chain:A ((2-285)) | SIIS---TKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFK--HIALEEIYALCSAYSTT-YNMPLALHLDHHESLDDIRRKVHA-----------GVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGS-----------AFLTDPQEAKRFVELT-GVDSLAVAIGTAHG--LYSKTPKIDFQRLAEIREVV-DVPLVLHGAS---------------------DVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENP-QGNDPRYYMRVGMDAMKEVVRNKINVCGSANRIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127562 for 2146 contacts (-59.4/contact) +
2D Compatibility (PS) -28146 + (NN) -14477 + (LL) 3212
1D Compatibility (HY) -22000 + (ID) 5400
Total energy: -194373.0 ( -90.57 by residue)
QMean score : 0.633
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