Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEKRLKAIQNKIASWIK-EIESGFIDALFSK-----------IGPSKMLRSKLMLALLDEKTDAILLDKALNLCAIVEMIQTASLLHDDVIDKATMRRKLPSINALFGNFNAVMLGDVFYSKAFFELSKMG----ESIAQALSNAVLRLSRGEIEDVFVGECFNSDKQKYWRILEDKTAHFIEASLKSMAILLNKDA---KMYADFGLHFGMAFQIIDDLLDITQDANTLGKPNFSDFKEGKTTLPYLLLYEKLNQHEQGLLISYFKQD---------SHEIIEWTKEKFKQHGIIEETLKIAQVYSKKALEAIKG-EN----NLILEKLAQDVIYRTF |
| 3NF2 Chain:A ((10-341)) | --ERGRTLATPVLRAAVDRLAPPMDTVAAYHFGWIDAQGNPADGDGGKAVRPALAVLSAEVTGAA--PEVGVPGAVAVELVHNFSLLHDDLMDGDEQRRHRDTVWKVHGPAQAILVGDALFALANEVLLELGTVEAGRATRRLTKASRSLIDGQAQDISYEHRDRVSVEECLEMEGNKTGALLACASSIGAVLGGADERTADTLEKYGYHLGLAFQAVDDLLGIWGDPDATGKQTWSDLRQRKKSLPVVAALAAGGAA-SERLGEILTADAKASDFANFSEEEFAARAALIEEAGGREWTADEARRQHTIAIEALDAVDMPDRVRDRFTALADFVVV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136229 for 2545 contacts (-53.5/contact) +
2D Compatibility (PS) -32759 + (NN) -22607 + (LL) 1096
1D Compatibility (HY) -4000 + (ID) 3350
Total energy: -197849.0 ( -77.74 by residue)
QMean score : 0.485
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