Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTTINHSVELVGIGLHKGVPVKLVLEPLEENQGIVFYRSDLG--VKLPLKPENIVDTKMATVL-GKDNARISTIEHLLSAVHAYGIDNLKISVDNEEIPIMDGSALTYCMLLDEAGIKELDAPKKVMEIKQAVEVREGDKFVKIEPDSQLSLNFTIDFNHPVI--AKQAHHFVFSKTAYKEQVAKARTFGFLQEVNYLRSIGLAKGGSLNNCIVLDENSILNKEGLRCEKEFVCHKILDAMGDLMVLGMPVMGKYTSFSGSHKLNSMLVKAILADAKNYEVLIASDPAKEFALQKAFA |
| 4MDT Chain:D ((4-292)) | --QRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGIDELNSAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166460 for 2384 contacts (-69.8/contact) +
2D Compatibility (PS) -30673 + (NN) -6457 + (LL) 948
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -236942.0 ( -99.39 by residue)
QMean score : 0.493
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