Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MADIL--SQEEIDALLEVVDENVDI--------------------QNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNL-SSQVSSIMRSIVEIQLHSVD-------QMTYGEFLMSLP----------------SPTSFNVFSMKPMGGTGVLEINPSIAFPMIDRLLGGKG-SAYDQNRE----FSDIELN---------LLDTILRQVMQILKEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVL----EIII--------GHSRG-----MMNIC--------------------YPVISIESILSKMGSRDFMLSETNSKKSRNKELQALLSGVSVDMMVFLGAVELSLKEMLDLDVGDTIR--LNKVANDEVSVYVHKKKRYLASVGFQGYRKTI----QIKEVVYSEKERTKEILEMLEEQRRGKVGDIMKIEEE |
| 5A1F Chain:A ((1-458)) | SMFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTP-RIQRLNELEAQTRVRDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLD------------VVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80428 for 2327 contacts (-34.6/contact) +
2D Compatibility (PS) -34705 + (NN) 2365 + (LL) 736
1D Compatibility (HY) -16800 + (ID) 3200
Total energy: -132032.0 ( -56.74 by residue)
QMean score : 0.219
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