Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFEKWIGLTLLLSSLGYPCQKVSISFKQYENLIHIHQKGCN--NEVVCRTLISIALLESSLGLNNKR-EKSLKDTSYSMFHITLNTAKKFYPTY---SKTLLKTKLLN-DVGFAIQLAKQILKENFDYYHQKHPNKSVYQLVEMAIGAYNGGMKHNPNGAYMKKFRCIYSQVRYNE |
1QQY Chain:A ((11-101)) | ---------------------------------KLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPNGMSAWVAWVKHCKGKDLSKYLASCNL------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14999 for 594 contacts (-25.3/contact) +
2D Compatibility (PS) -8550 + (NN) 1033 + (LL) 4396
1D Compatibility (HY) -5200 + (ID) 700
Total energy: -24020.0 ( -40.44 by residue)
QMean score : 0.293
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