Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINNNNNNKKLRGFFLKVLLSLVVFSSYGSANDDKEAKKEALEKEKNTPNGLVYTNLDFDSFKATIKNLKDKKVTFKEVNPDI--IKDEVFDFVIVNRVLKKIKDLKHYDPVIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLHGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTIESLKKIFYTITCEAVYL
1VLM Chain:A ((69-134))------------------------------------------------------IGVEPSE--RMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKVFYKNARFFSTEELMDLMRKAGFEEFKVVQTLFKHPSELSEIEPVKEGYGEGAFVVIRGTKK----


General information:
TITO was launched using:
RESULT:

Template: 1VLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10305 for 364 contacts (-28.3/contact) +
2D Compatibility (PS) -6735 + (NN) -798 + (LL) 3376
1D Compatibility (HY) 0 + (ID) 500
Total energy: -14962.0 ( -41.10 by residue)
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_1VLM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VLM-query.scw
PDB file : Tito_Scwrl_1VLM.pdb: