Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDREQIIALQHQRFATKKYDPNRRISEKDWEVLVEVGRLAPSSIGLEPWKMLLLKNERMKEDLKPMA----WGGLSSLEGASHFVIYLARKGVTYDSDYVKKVMHEVKKRDYDTHSRFAQIIKNFQENDIKLNSE-RSLFDWASKQTYIQMANMMMAAAMLGIDSCPIEGYDQEKVEAYLEEKGYLNTAEFGVSVMASFGYRN-----QEITPKTRWKTEVIYEVIE |
| 1VFR Chain:A ((2-218)) | --THPIIHDLENRYTSKKYDPSKKVSQEDLAVLLEALRLSASSINSQPWKFIVIESDAAKQRMHDSFANMHQFNQPHIKACSHVILFANK--LSYTRDDYDVVLSKAVADKRITEEQKEAAFASF-KFVELNCDENGEHKAWTKPQAYLALGNALHTLARLNIDSTTMEGI--D--PELLSEIFADELKGYECHVALAIGYHHPSEDYNASLPKSRKAFEDVITIL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65798 for 1466 contacts (-44.9/contact) +
2D Compatibility (PS) -22425 + (NN) -7935 + (LL) 548
1D Compatibility (HY) -8800 + (ID) 2500
Total energy: -106910.0 ( -72.93 by residue)
QMean score : 0.573
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