Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH |
| 1SF9 Chain:A ((23-51)) | -----------------------------------------------NAMEKRYSQMTPHELNTEIALLSEKARKAEQHGIINELAVLERKITMAKAYLLNPEDYSPGETYRVENTEDEFTISYLNGVFAWGYRTSSPQQEEALPISVLQEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SF9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1133 for 117 contacts (-9.7/contact) +
2D Compatibility (PS) -3421 + (NN) -3561 + (LL) 3888
1D Compatibility (HY) -800 + (ID) 350
Total energy: -5377.0 ( -45.96 by residue)
QMean score : 0.770
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