Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGYIPYVIENTERGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK
2ZL4 Chain:D ((20-192))
------------------DIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQ----
General information:
TITO was launched using:
RESULT:
Template:
2ZL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119985 for 1355 contacts (-88.5/contact) +
2D Compatibility (PS) -18868 + (NN) -7960 + (LL) 1296
1D Compatibility (HY) -25200 + (ID) 8600
Total energy: -179317.0 ( -132.34 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_2ZL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZL4-query.scw
PDB file :
Tito_Scwrl_2ZL4.pdb
: