Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVYPQVLSIAGSDSGGGAGIQADLKAFQTFGVFGTSVITCI-TAQNTQGVHGVYPLSVESVKAQI---LAIRDDFSIKAFKMGALCNAQIIECVANALETCDFGLCVLDPVMVAKNGALLLEEEAILSLKKRLLPKTNLLTPNLPEVYALTGVQARDD-KSASKAMGVLRDLGVKNAVIKGGHTEHFQGEFSNDWVFLEDAEFILSAKRFNTKNTHGTGCTLSSLIVGLLAQGLDLKNAITKAKELLTIIIQNPLNIGHGHGPLNLWSIKKHV |
| 4C5J Chain:B ((5-259)) | -----KVLTIAGSDTSAGAGMQADLKTFQELDTYGMVALTAIVTMDKDTWSHDVTPLPMDVFEKQLETALSIGPD----AIKTGMLGTEEIIKRAGEVYEASNAQYFVVDPVMVCKGEDEVLNPGNTEAMIKYLLPKATVVTPNLFEAGQLSGLGKLNSIEDMKKAATIIFDKGAQHVIIKGGKA--LDQDKSYDLYYDGQTFYQLTTDMFQQSYNHGAGCTFAAATTAYLANGKSPKEAVISAKAFVASAIKNGWKMNDFVGPVDHGAYNRIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160961 for 2223 contacts (-72.4/contact) +
2D Compatibility (PS) -27904 + (NN) -13574 + (LL) 936
1D Compatibility (HY) -12800 + (ID) 4200
Total energy: -218503.0 ( -98.29 by residue)
QMean score : 0.472
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