Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDDLIQKEFLAHKEALEKSL-ESLQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKP---LSDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN
1X92 Chain:A ((5-197))
-MQHRIRQLFQASIETKQQALEVLPP-YIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVPSKITARIQEVHLLAIHCLCDLIDRQLFGS-
General information:
TITO was launched using:
RESULT:
Template:
1X92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103583 for 1577 contacts (-65.7/contact) +
2D Compatibility (PS) -20784 + (NN) -12426 + (LL) 52
1D Compatibility (HY) -15600 + (ID) 4400
Total energy: -156741.0 ( -99.39 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_1X92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X92-query.scw
PDB file :
Tito_Scwrl_1X92.pdb
: