Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKIQKIHPNALIPKYQTEGSSGFDLHAVEEVVIKPHSVGLVRIGICLSLEVGYELQVRTRSGLALNHQVMVLNSPGTVDNDYRGEIKVILANLSDKDFKVQVGDRIAQGVVQKTYKAEFIECEQLDETSRGSGGFGSTGVSKA
3C3I Chain:D ((6-131))
----VKKLVESATTPMRGSEGAAGYDISSVEDVVVPAMGRIAVSTGISIRVPDGTYGRIAPRSGLAYKYGIDVLA--GVIDSDYRGEVKVILYNTTERDYIIKKGDRIAQLILEQIVTPGVAVVLDLSDTAR-------------
General information:
TITO was launched using:
RESULT:
Template:
3C3I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74513 for 823 contacts (-90.5/contact) +
2D Compatibility (PS) -13447 + (NN) -3221 + (LL) 12
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -100969.0 ( -122.68 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3C3I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3I-query.scw
PDB file :
Tito_Scwrl_3C3I.pdb
: