Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------MAIDLAEVTGAK-------------AAQERKKEQPTIA-NGLDKNAFMKLFLEQL----KNQDPTAPMETDKIITQTAQLTQVEMQEENKKTMQEVASAMKSNKETNESLKDFQGALKDTMENLNKGMDDSLKANN-----ALREVSALNSVSMIGKIA-----------ETDVSGANFDGNNKLSFSLFFDEK---IDASKGVPAIQILNENNELVKTIPLKDYNGQKGYINFEWDGTNEKGEKVPKGNYKIKAEYNLDSQSKQYLQTRIGRGEVE-SVIFDKGKPM--------LRMGEMILPIDSAIEFYKPDQKPLDQ---KLSDQKPQ-KLSEQKALEQKIS-----EQKPQEPLDQKLSDQKPQKPLEQKI--------SEQKPLDQKL-----SDQKPQKPLEQKIS---EQKPLDQKPQTPPKETA---------------------- |
| 3ALX Chain:A ((8-549)) | CSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVEKPSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETC--FQQACKGKIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNVYWLTIPPMKNLALGVINTLEWIPRFKVSPYRF----TVPIKEAGGDCHAPTYLPAEVD--GDVKLSSNLVI-----LPGQDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCCPKIVQQLGSDVLLPLTHERINTSMNKSIHIVVTMAKSLENSVENKIVSLDPSEAGPPRYLKDRYRFYLEHLSLAIYESTKKDEGWYFMTLEKNISVQRFCLHLKLYE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ALX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 145054 for 2262 contacts (64.1/contact) +
2D Compatibility (PS) -35453 + (NN) 4072 + (LL) 1016
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: 96439.0 ( 42.63 by residue)
QMean score : 0.147
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