Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPK-ATALSDELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKV-PLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYEWAKKEGLGSVDYYINELVHKKA
4L2C Chain:B ((2-191))
-FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVRSSDGGVFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLV-KLADGSLDIVNTSNAATPLTDDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANFA----------------------
General information:
TITO was launched using:
RESULT:
Template:
4L2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106857 for 1480 contacts (-72.2/contact) +
2D Compatibility (PS) -19348 + (NN) -5777 + (LL) 1808
1D Compatibility (HY) -18000 + (ID) 4650
Total energy: -152824.0 ( -103.26 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_4L2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L2C-query.scw
PDB file :
Tito_Scwrl_4L2C.pdb
: