Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRIDKDYKKQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGELFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVAL----SKQVVFSINDCKENEKTLVIGGGNSAVEYAIALCKTTP-TTLNYRKKEFSRINEDNAKNLQEVLDNNTLKSKLGVDIESLEEDNTQIKVNF---TD--NTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKS--GASIATALNHGYDVAIEIAKRLQS |
3F8D Chain:A ((13-317)) | --GEKFDVIIVGLGPAAYGAALYSARYMLK-TLVIGETP--GGQLTEAGI-----VDDYLG----------LIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENR--EFVVKTKRKGEFKADSVILGIGVK--RRKL-GVPGEQEFAGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-Q---PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTN-GYIKVDEWMRT-SVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3F8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -165106 for 2560 contacts (-64.5/contact) +
2D Compatibility (PS) -30930 + (NN) -8037 + (LL) 1456
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -215917.0 ( -84.34 by residue)
QMean score : 0.500
|
|
|