Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVKRLNPDALKSALQKIGPEKIAQTHMRQKGVSFVFEIQHLPLSAALILKQEAISVGGDFATPRDCILAKEPFYDGVLIASAKQLERLIVKCHSQPFGLKHLAQELKSHLKAKKPNAPQIMAILNLTPDSFYEKSRFDS-KKALEEIYQWLEKGITLIDIGAASSRPQSEIIDPKVEQDRLKEILLEIKSQKLYQRAQFSIDTYHATTAQMALEHYFSILNDVSGFNS-IEMLEVARDYQPTCILMHAQKTPKDMQENVFYHNLFDEMDRFFKEKLEVLEKYTLQD--IILDIGFGFAKLKEHNLALIKHLSHFLKFKKPLLVGASRKNTIGLITGREVQDRLAGTLSLHLMALQNGASILRAHDIDEHIDLIKVFKSLEETD
3TYD Chain:A ((42-291))------------------------------------------------------------------------------------------------------------------------IMGILNVTPDSFS--GSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKV--SVEEE-IKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNR-------DNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK-


General information:
TITO was launched using:
RESULT:

Template: 3TYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171226 for 2052 contacts (-83.4/contact) +
2D Compatibility (PS) -26593 + (NN) -18887 + (LL) 9740
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -227066.0 ( -110.66 by residue)
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_3TYD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TYD-query.scw
PDB file : Tito_Scwrl_3TYD.pdb: