Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFTRIPLKVFIKKYNPQEPKKETIENFEKEINSLLENVPRQDDEEFQKNEINKFLKNAYGYDCNTYEKVDSVIYVDKEVRVLIEVKALNNKTEFPKNRENPLSKAFCQMVLYFLEEIEKEKNNSLKHTIICNAHEFFLFDCKDLLSLKEDKRIKKFYKNYAKKEGTDSSKPKFYKDLEQFLQEDFQGELRYTHFNLSDDFKELPLIYQVLSQEVLLKQKRTLDANTLNKDFYEELLYILGLEEQNDKGKILIKPSRTKNSLSGALKEKYKNLDDEEVMALLIAWNNRILFLRLLESLLISFEHFEKERSFLTTGNFKDFNALNTLFFEVLAKKNSERLPEIKENKILGKIPYLNSSLFDKTPLELKGHEIKLLDNKKLEIYKNSVLKKHENYQKDKASLPLLEYFFKFLHLYKFTTTPKDIKDNTDTSESRLINPSVLGLVFEKLNGYKEGSFYTPSFITSYMCKESITTIVLDKFNQKYNIECDKLKELKNYLKNSYKEDKRKEYLQLLLTLRICDPAVGSGHFLVSALNEMVLIAYELGLIASLHRYSLTLENDEIIIHYTPTGEIFNYKKPLRENDPHHHIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFEEGKNTNALETLPNIDINIKCANSLISRFNLNDDLKKIPNIKKKIQEYKDLVAQYKDPNPLYPLNKADLINKIQDLKNTFSLTLKDPKTKAELEKTIEKHIKKYNFFALDDKSLLDGLNYFIPSLFGTLKLSPKEEEEAFASYGRIRALRKKLDDALSGGEYQNAFEWRFEFPEVLDDEGDFLGFDCIIGNPPYIRQEQIKDL-KPLLEKQYQ------DFYNSTADIYTYFFALSFHLLREKGFSAFITSNKYARA--KYGAKLREWLLKKTTLVSYMELNALKVFESAAVDTSIIHFIKQPPLKESDFKYYEPTP--D--DKDDLK---S----------T--PYLSMKQNALS---TESFIFANAT---LLDLRDK-IESVGTPL-KDWDIQINYGIK--TGANE-AFIIPTEKRDEILNACKTQEERERTERLIKPILRGK-DIKRYSYEWA--GEWLINTHNGYTSNLKSKIPPIDIEKYPATKAHLDAH------------YDTIATRCDQGDTPYHLRNCAYLEDFEKEK-IVYPETS-QGAYFIYENSGIFLEKTVFMIVS-DAYNLKLLTALLNSKLITFYFKNFCGGCILGKSGYQYNKHALEKIPIPQITEKNQELADKITDCAEQILALKAKDPKANTQKLEKEIDALVYQLYHLTDEEIKTIEDGQ |
| 3S1S Chain:A ((399-853)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKGSSVE--EIEVLDSFTPLEQVDLHNLKRALSNSSNEQIIQPMGMELRKEKREELENRVTVGWRHITSNGRVAEEWITNNLESHCIRLVASD-YDLRRGRVGNKGASDLLFINSKKKLWDLL-------DESVPRDWLYPALRKVNEINTPIFNEDATPVRFLCPPNSAYQDG----TGESIILDKILDVYVDFQVYKSKQKKFEKSKEELKEILYK-------ESDF----YSSEHTVFIPRALRRSARAFINEQKVFCSTNALEVFGGNSEEMWLLLSWLSSVFAQLQFEAMAK--DQ-EGERKLEKKSIQNLYIPNLGDIDDVLKQDLIEEVREIHFFDL------CRPRVRKLDLLWAKVFWSGNEMSKTKEAAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141511 for 2833 contacts (-50.0/contact) +
2D Compatibility (PS) -42243 + (NN) -13111 + (LL) 56924
1D Compatibility (HY) -18000 + (ID) 3100
Total energy: -161041.0 ( -56.84 by residue)
QMean score : 0.312
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