Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKLIQFLFIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKTKLINAIHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIHIQYYIFKTDAISTEIRDILVEKAKSGVEVRFMFDGLGSSKLGKAFLAPLKEAGVSIHAFDPIASPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHIKITGQAVIELQESFLNDWVYMENQAGAADGFISESGSKQYFSPVDMGDEWAQVIYGGPYDKEKWVRDSMLDLIDSAKESVWIVSPYFVPDEESLAVIRRVAMSGVDVRVIIPGKGDRGISFHGSNAYVKTMIEAGAKMYAYADDSFVHAKAMLVDGTRAAIGTANFDVRSFRLNHELMVFLYDESEAMHHLKRDFKKDFEDSRLFTMKDMENKPLLTRIKEVLSSLLSPIL |
1C0P Chain:A ((1-363)) | -------------------LMMHSQKRVVVLGSG---VIGLSSALILARKG----------------------YSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVELVP-----TGHAMWLKGTRRFAQNEDGLLGHWYKDITPNYRP---LPSSEC--PPGA-IGVTYDTLS--VHAPKYCQYLARELQKLGATFERRTVTS----LEQAFD-GADLVVNATG---------------LGAKSIAGIDDQAAEPIRGQTVLVKSP-CKRCTMDSSDP-------A---SPAYIIPRPGG----EVICGGTYGVGDWDLSVNPETVQRILKHCLRLDPTISSDGTIEGI--EVLRHNVGLRPARRG----------GPRVEAERIVLP------------------LDRTKSPLSLGRGSARAAKEKEVTLVHAYGFS----------------SAGYQQSWGAAEDVAQLVDEAFQRYHG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161703 for 3177 contacts (-50.9/contact) +
2D Compatibility (PS) -38036 + (NN) -2794 + (LL) 10848
1D Compatibility (HY) 1600 + (ID) 2250
Total energy: -192335.0 ( -60.54 by residue)
QMean score : 0.224
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