Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGDLKLRPLEREDLKFVHRLNNDAKIMSYWFEEPYEAFVELQELYDKHIHDQSERRFILELDGQ--MVGLVELMEIDYIHRRAEFQIIIDPKFQGHGYAVSATKLAMKYAFHVLNMHKLYLVVDKVNEKAIHVYEKVGFIREGELIDEFFVDGTYHDAIRMCIFQHQYREMDI
4R57 Chain:F ((5-171))
-NSQLTLRALERGDLRFIHNLNNNRNIMSYWFEEPYESFDELEELYNKHIHDNAERRFVVE-DAQKNLIGLVELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRMYILQSKY-----
General information:
TITO was launched using:
RESULT:
Template:
4R57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101823 for 1170 contacts (-87.0/contact) +
2D Compatibility (PS) -17616 + (NN) -6864 + (LL) 924
1D Compatibility (HY) -22000 + (ID) 4850
Total energy: -152229.0 ( -130.11 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_4R57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R57-query.scw
PDB file :
Tito_Scwrl_4R57.pdb
: